Dept. of Life Science

한상진
  • Field

  • Name

    Korean Han, Sang-jin

  • Title

    The Division of Life Science (Major in biology) / Professor

  • Office

  • Tel

    (033) 248-2094

  • email

Educational background

1972. 3. ∼ 1976. 2. The Department of Biology, Ewha Womans University (Bachelor)

1978. 3. ∼ 1983. 2. The Department of Biology, Tuebingen of University, Germany (Diploma)

1983. 3. ∼ 1986. 2. The Department of Biology, Tuebingen of University, Germany (Ph. D.) 

Major careers

1972. 3. ∼ 1976. 2. The Department of Biology, Ewha Womans University (Bachelor)

1978. 3. ∼ 1983. 2. The Department of Biology, Tuebingen of University, Germany (Diploma)

1983. 3. ∼ 1986. 2. The Department of Biology, Tuebingen of University, Germany (Ph. D.) 

Studies & Books

■ Theses
- "Diversion of locomotor activity rhythm and neural control Azadirachtin in Leucophaea maderae", 동물학회지, 1988.10
- "저준위 방사능이 Neurospora crassa의 리듬에 미치는 영향", 발암원학회지, 1991.3
- "LiCl이 Goldhamster의 빛민감성과 활동주기에 미치는 영향", 동물학회지, 1992.10
- "방사선물질 Li+, Rb+, Cs+이 Neurospora crassa의 성장 일주기에 미치는 영향", 한국독성학회지, 1993.4
- "Neurospora crassa의 포자형성주기에 미치는 빛-파장과 중금속이온의 영향관계 조사", 한국환경독성학회지, 11, 1995.
- "Melatonin and other Methoxyindoles in Yeast, Saccharomyces cereviside", Journal of Uni Goettingen, 1996.
- "Circardian Locomotor Activity of Musca Flies: Effects of 50 and 100Hz Squarewave Electric Fields", Bioelectromagnetics, 18, 1997.

Others

■ Research Field

- 동물생리학, 생체주기학, 생태학 

김영동
  • Field

    식물다양성

  • Name

    Korean Kim, Yeong-dong

  • Title

    Professor

  • Office

    Life Science Hall 8310

  • Tel

    033-248-2095

  • email

Educational background

Bachelor of the Department of Botany, Seoul National University (Major in Botany)
Master of the Department of Botany, Seoul National University Seoul National University (Major in plant taxonomy)
Doctor of the Department of Botany, [University of Texas at Austin, the Graduate School (Major in plant molecular phylogeny)

 

Major careers

Chief editor of the Korean Jounal of plant taxonomy

 

 

Studies & Books

■ Theses
- Chrysosplenium aureobracteatum (Saxifragaceae), a New Species from South Korea - NOVON (2014)
- Quantitative ethnobotanical study of the medicinal plants used by the Ati Negrito indigenous group in Guimaras Island, Philippines - Journal of Ethnopharmacology (2014)
- Molecular evidence for hybrid origin of Aster chusanensis, an endemic species of Ulleungdo, Korea - Journal of Plant Biology (2014)
- Biodiversity of Mt. Popa, Myanmar - Book (2014)
- Vascular Plants of Dokdo and Ulleungdo Islands in Korea - Book (2014)
- Genetic diversity of Millettia japonica in Korea as revealed by ISSR analysis - 한국식물분류학회지 (2013)
- 식물계통학 - 역서 (2011) 

Others

■ Major Research Topics
- Phylogenetic classification and discovery of new species by analyzing plant's genetic information.
- Movements of Korean major plants by using molecular markers
- Plants in Korea and Southeast Asia (Cambodia and Myanmar)
- Population genetic studies for conservating rare plants
- An analysis on medicinal and esculent plants in East Asia

전성호
  • Field

    Molecular immunology

  • Name

    Korean Sung Ho Jeon

  • Title

    Professor

  • Office

    Life Science Hall 8313

  • Tel

    033-248-2096

  • email

Educational background

1990, Seoul National University; Zoology (B.S)

1992, Seoul National University; Molecular Biology (M.S)

1998, Seoul National University; Immunology (Ph.D)  

Major careers

90. 3 ~ 92. 2, Seoul National University; Dept. of Molecular Biology (Grad. Student)

92. 3 ~ 93. 2, Seoul National University; Dept. of Molecular Biology (T. A.)

97. 3 ~ 99, 12, Seoul National University; Research Center for Cell Differentiation (Post -Doc)

00, 1 ~ 01, 12, Weizmann Institute of Science (Israel); Dept. of Immunology (Post-Doc)

02, 1 ~ 03. 1, Mount Sinai School of Medicine (NewYork); Dept. of Microbiology (Post-Doc)

03, 5 ~ 05, 2, Seoul National University ; BK21 (Assiatant Prof.)

05, 3 ~ 09, 2, Hallym University ; Dept. of Life Science (Assistant Prof.)

09, 3 ~ present, Hallym University ; Dept. of Life Science (Associate Prof.) 

Studies & Books

■ Theses
- Fisetin-rich extracts of Rhus verniciflua stokes improve blood flow rates in mice fed both normal and high-Fat diets. 2016. J Med Food. 19(2):120-6.
- IL32γ activates natural killer receptor-expressing innate immune cells to produce IFNγ via dendritic cell-derived IL12. 2015. Biochem Biophys Res Commun.461(1):86-94.
- The HIF-1/glial TIM-3 axis controls inflammation associated brain damage under hypoxia. 2015. Nat Commun.6:6340. doi: 10.1038/ncomms7340.
- Nanobody-targeted E3-ubiquitin ligase complex degrades nuclear proteins. 2015. Sci Rep.5:14269.
- Application of in utero electroporation of G-protein coupled receptor (GPCR) genes, for subcellular localization of hardly identifiable GPCR in mouse cerebral cortex. 2014. Mol cells.37(7):554-561.
- nc886, a non-coding RNA of anti-proliferative role, is suppressed by CpG DNA methylation in human gastric cancer. 2014. Oncotarget5(11):3944-3955.
- TopBP1 deficiency impairs V(D)J recombination during lymphocyte development. 2014. EMBO J. 33(3):217-228.
- Cell death/proliferation roles for nc886, a non-coding RNA, in the protein kinase R pathway in cholangiocarcinoma. 2013. Oncogene32(32):3722-31.
- Compartmentalized, functional role of angiogenin during spotted fever group rickettsia-induced endothelial barrier dysfunction: evidence of possible mediation by host tRNA-derived small noncoding RNAs. 2013. BMC Infect Dis.23;13:285.
- Involvement of the cAMP response element binding protein, CREB, and Cyclin D1 in LPA-induced proliferation of P19 embryonic carcinoma cells. 2012. Mol cells.34(3):323-328.
- A tumor surveillance model: A non-coding RNA senses neoplastic cells and its protein partner signals cell death. 2012. Int. J. Mol. Sci.13(10):13134-13139.
- Characterization of the direct physical interaction of nc886, a cellular non-coding RNA, and PKR. 2012. FEBS Lett.586(19):3477-3484.
- DNA Aptamers against the Receptor Binding Region of Hemagglutinin Prevent Avian Influenza Viral Infection. 2011. Mol. cells32(6):527-533.
- Activation of natural killer T cells inhibits the development of induced regulatory T cells via IFNγ. 2011. Biochem. Biophys. Res. Commun..411(3):599-606.
- Gold nanoparticle-based colorimetric detection of kanamycin using a DNA aptamer. 2011. Anal. Biochem.415(2):175-81.
- Precursor miR-886, a novel noncoding RNA repressed in cancer, associates with PKR and modulates its activity. 2011. RNA 17(6):1076-89.
- Galectin-3 exerts cytokine-like regulatory actions through the JAK-STAT pathway. 2010. J Immunol.185(11):7037-46.
- Twist2 regulates CD7 expression and galectin-1-induced apoptosis in mature T-cells. 2009. Mol Cells.28(6):553-558.
- The Effect of CD28 Stimulation on in vitro Generation of Regulatory T Cells with IL2 and TGFβ. 2008. GENES &GENOMICS. 30(6): 555-561.
- Down-Regulation of the SWI/SNF Chromatin Remodeling Activity by TCR Signaling Is Required for Proper ThymocyteMaturation. 2007. J Immunol.178(11):7088-96.
- SRG3 interacts directly with the major components of the SWI/SNF chromatin remodeling complex and protects them from proteasomal degradation. 2007. J Biol Chem.282(14):10614-24.
- Notch1 Confers Thymocytes a Resistance to GC-induced Apoptosis via Deltex1 by Blocking the Recruitment of p300 to E2A/HEB and Regulating the SRG3 Expression. 2006. Cell death differ.13:1495-1505.
- Expression of SRG3, a Core Component of Mouse SWI/SNF Chromatin Remodeling Complex, Is Regulated by Cooperative Interactions between Sp1/Sp3 and Ets Transcription Factors. 2005. Biochem. Biophys. Res. Commun. 338:1435-1446.
- Ecto-and exo-protein kinases in Schistosoma mansoni: regulation of surface phosphorylation by acetylcholine and identification of the alpha subunit of CKII as a major secreted protein kinase. 2005. J. Parasitol. 91:756-63.
- Modulation of androgen receptortransactivation by the SWI3-related gene product (SRG3) in multiple ways. 2005. Mol. Cell Biol. 25(12) 4841-4852.
- A DNA aptamer prevents influenza infection by blocking the receptor binding region of the viral haemagglutinin. 2004. J. Biol.Chem.279(46): 48410-48419.
- Nitric oxide inhibits glucocorticoid-induced apoptosis oft hymocytes by down-regulating the SRG3 expression. 2004. J. Biol.Chem. 279(33): 34373-34379.
- E2A/HEB and Id3 proteins control the sensitivity to glucocorticoid-induced apoptosis in thymocytes by regulating the SRG3 expression. 2004. J. Biol. Chem. 279(21): 21916-23.
- T-cell receptor signaling inhibits glucocorticoid-induced apoptosis by repressing the SRG3 expression via Ras activation. 2004. J. Biol. Chem. 279(21): 21903-15.
- Twist2, a novel ADD1/SREBP1c interacting protein, represses the transcriptional activity of ADD1/SREBP1c. 2003. Nucleic Acids Res.31(24):7165-74.
- Overexpression of SRG3/SWI3 protein disrupts the cell cycle progression in mature T cells and yeast. 2002. Korean J. Biol.Sci. 6:335-339.
- Intranasal immunization with synthetic recombinant vaccine containing multiple epitopes of influenza virus. 2002. Vaccine20: 2772-2780.
- Immunization with Influenza Virus Hemagglutinin Globular Region Containing the Receptor-Binding Pocket. 2002. Viral Immunol. 15: 165-176.
- Notch1 confers developing thymocytes a resistance to glucocorticoid induced apoptosis by down-regulating SRG3 expression. 2001. Proc. Natl.Acad. Sci. U.S.A. 98:10267-72.
- Two species of mRNAs for the fyn proto-oncogene are produced by an alternative polyadenylation. 1998. Mol. &Cells8:746-749.
- Down-regulation of Tcf-1 expression by activation-induced apoptosis of T cell hybridoma. 1998. Korean J. Biol.Sci. 2:403-410.
- Expression of Tcf-1 mRNA and surface TCR/CD3 complexes are reduced during apoptosis of T-cells. 1998. Int. Immunol. 10:1519-1527.
- A new mouse gene, SRG3, related to the SWI3of Saccharomyces cerevisiae, is required for apoptosis induced by glucocorticoids in thymoma cell line. 1997. J. Exp. Med. 185:1827-1836.
- Overexpressed RAD4 protein required for excision repair of Saccharomyces cerevisiaeis toxic to the host Escherichia coli. 1994. In Vitro Toxicol. 7:269-275.
- Expression of RAD4gene of Saccharomyces cerevisiae that can be propagated in Escherichia coli without inactivation. 1993. Biochem. Biophys. Res. Commun. 193:191-197.
- The isolated RAD4gene required for nucleotide excision repair in Saccharomyces cerevisiaedose not contain a suppressor gene. 1990. Korean J. Genetics. 12:147-155.


■ Books
- 세균과 세균바이러스의 유전학. 2015. 필수 유전학 6판. by D.L. Hartl (ed. 양재섭 외). chap. 7, pp 226-259. 바이오사이언스 출판
- 번역, 조절 RNA, 2014. 왓슨 분자생물학 7판 by J. Watson (ed. 양재섭 외). chap. 15, pp. 509-571; chap. 20, pp. 701-732 바이오사이언스 출판
- 세포생물학, 2014. by G. Plopper 범문 에듀케이션
- 전이. 2013. 분자생물학 5판 by R.F. Weaver, (ed. 최준호 외). chap. 23, pp. 677-701. 라이프사이언스
- 필수세포생물학 2판. 2003. by B.Alberts (ed. 박상대 외) 교보문고
- Apoptosis in immune system. 1998. 유전. 2: 129-146.


■ Patent
- DNA aptamers and their mixture for the prevention of infection and detection of avian influenza virus, H9N2. 2008. Korea 10-2008-0039199.
- Nucleic acid molecules, polypeptides, antibodies and compositions for treating and detecting influenza virus infection. 2010. US 7786279 B2
- DNA aptamer binding to kanamycin with specificity. 2010. Korea 10-1263450
- DNA aptamer binding to ampicillin with specificity. 2010. Korea 10-1258600
- DNA aptamer binding to sulfadimethoxine with specificity. 2010. Korea 10-1263449
- Functional health food composition using color food for anti-oxidative and anti-inflammatory effect and method for manufacturing the same. 2015. Korea 10-2015-0024442

Others

■ Academy Activity
- 한국세포분자생물학회 재무위원
- 대한면역학회 정회원
- 한국유전학회 정회원


■ Major Research Topics
- non-coding RNA에 의한 면역세포의 분화 및 암 조절 기전 연구: 단백질을 암호화하지 않는 비번역 RNA가 면역기능을 담당하는 대식세포의 분화와 활성 조절에 관여하는 신호전달과 유전자 발현에 중요한 조절자로서 기능할 가능성에 대한 연구. 이 RNA는 세포의 증식과 암세포의 발병과정에서도 중요한 역할을 한다는 것을 밝힘으로써, 항암 또는 면역질환의 치료제 발굴에 관한 단서를 제공함.
- 항-바이러스 치료제 및 백신 개발: 인플루엔자 바이러스 감염을 억제하는 치료제 및 백신 후보물질의 발굴과 관련된 연구
- 기능성 천연소재의 면역활성 효능평가 및 조절기전 분석: 국내외 다양한 식물에서 유래한 면역조절 후보물질의 효능평가를 통한 기능성 식품, 화장품, 면역조절 치료제 발굴과 관련된 연구

정동훈
  • Field

    Plant genetics

  • Name

    Korean Dong-Hoon Jeong

  • Title

    Assistant professor of the Department of Life Science

  • Office

    Life Science Hall 8306

  • Tel

    033-248-2092

  • email

Educational background

1998.03 ~ 2003.02 Doctor of Science, the Department of Life Science, Pohang University of Science & Technology

1996.03 ~ 1998.02 Master of Science, the Department of Life Science, Pohang University of Science & Technology

1992.03 ~ 1996.02 Bachelor of the Department of Biology, Yonsei University

 

Major careers

2014.09 ~ present Assistant professor of the Department of Life Science, Hallym University

2009.08 ~ 2014.08 Associate Scientist, University of Delaware

2006.07 ~ 2009.08 Postdoctoral researcher

2003.03 ~ 2006.07 Postdoctoral researcher, Pohang University of Science & Technology

 

Studies & Books

■ Theses
- Schmidt SA, Foley PL, JeongD-H, Rymarquis LA, Doyle F, Tenenbaum SA, Belasco JG,, and Green PJ. (2015) Identification of SMG6 cleavage sites and a preferred RNA cleavage motif by global analysis of endogenous NMD targets in human cells. Nucleic Acids Res. 43: 309-323
- Jeong D-H, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, De Paoli E, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, and Green PJ. (2013) Parallel analysis of RNA ends enhances global investigation of miRNAs and target RNAs of Brachypodium distachyon. Genome Biology 14:R145
- Jeong D-H, and Green PJ. (2013) The role of rice microRNAs in abiotic stress responses. J. Plant Biol. 56: 187-197 (review)
- Jeong D-H*, Thatcher SR*, Brown RSH, Zhai J, Park S, Rymarquis LA, Meyers BC, and Green PJ. (2013) Comprehensive investigation of microRNAs enhanced by analysis of sequence variants, expression patterns, ARGONAUTE loading and target cleavage. Plant Physiol. 162:1225-1245 (*co-first authors)
- Jeong D-H, and Green PJ. (2012) Methods for validation of miRNA sequence variants and the cleavage of their targets. Methods 58:135-143
- Song X, Li P, Zhai J, Zhou M, Liu B, Ma L, JeongD-H, Nakata M, Cao S, Liu C, Chu C, Wang X-J, Green PJ, Meyers BC, and Cao X.(2012) Role of DCL4 and DCL3b in rice phased small RNA biogenesis. Plant J. 69:462-474
- 1. Jeong D-H, Park S, Zhai J, Gurazada SGR, De Paoli E, Meyers BC, and Green PJ. (2011) Massive analysis of rice small RNAs: Mechanistic implication of regulated miRNAs and variants for differential target RNA cleavage. Plant Cell 23: 4185-4207
- Zhai J, JeongD-H,De Paoli E,Park S,Rosen BD, Li Y, González AJ,Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC. (2011) microRNAs as Master Regulators of the Plant NB-LRR Defense Gene Family via the Production of Phased, Trans-acting siRNAs. Genes &Development 25:1540
- Young ND, Debellé F, Oldroyd G, Geurts R, Cannon SB, Mayer KFX, Gouzy J, Van de Peer Y, Schoof H, Udvardi MK, Cook DR, Meyers BC, Spannagl M, Cheung F, De Mita S, Proost S, Krishnakumar V, Gundlach H, Zhou S, Mudge J, Bharti AK, Benedito VA, Murray JD, Naoumkina MA, Rosen B, Silverstein KA, Tang H, Rombauts S, Zhao PX, Zhou P, Barbe V, Bardou P, Bechner M, Bellec A, Berger A, Bergès H, Bidwell S, Bisseling T, Choisne N, Couloux A, Denny R, Deshpande S, Doyle JJ, Dudez A-M, Farmer AD, Fouteau S, Franken C, Gibelin C, Gish J, González AJ, Green PJ, Hallab A, Hartog M, Hua A, Humphray S, JeongD-H, Jing Y, Jöcker A, Kenton SM, Kim D-J, Kathrin Klee, Lai H, Lang C, Lin S, Macmil SL, Magdelenat G, Matthews L, McCorrison J, Monaghan EL, Mun J-H, Najar FZ, Nicholson C, Noirot C, Paule CR, Poulain J, Prion F, Qin B, Qu C, Retzel EF, Riddle C, Sallet E, Samain S, Samson N, Saurat O, Scarpelli C, Schiex T, Segurens B, Seigfried M, Severin A, Sherrier DJ, Shi R, Sims S, Sinharoy S, Sterck L, Vasylenko I, Viollet A, Wang K, Wang B-B, Wang X, Warfsmann J, Weissenbach J, White DD, White JD, Wiley GB, Wincker P, Xing Y, Yang L, Yao Z, Ying F, Zhai J, Zhou L, Zuber A, Dénarié J, Dixon RA, May GD, Schwartz DC, Rogers J, Quétier F, Town CD, Roe BA. (2011) The Medicago Genome Provides Insight into the Evolution of Rhizobial Symbioses. Nature 480:520-524 

Others

■ Major research performance

- RNA Genomics

- Crop Functional Genomics

- Post-transcriptional Gene Regulation 

김봉수
  • Field

    Microbiology(Microbiome)

  • Name

    Korean Kim, Bong-Soo

  • Title

    Assistant professor of the Department of Life Science

  • Office

    Life Science Hall 8309

  • Tel

    033-248-2093

  • email

Educational background

1997 ~ 2001 Bachelor, Department of Applied Biology and Chemistry, Seoul National University
2001 ~ 2007 Doctor, School of Biological Science, Seoul National University

Major careers

2007 ~ 2008 Postdoctoral Researcher, Institute of Microbiology, Seoul National University
2008 ~ 2011 Postdoctoral Researcher, National Center for Toxicological Research, US F.D.A.
2011 ~ 2014 Director, Research Center for Bioinformatics, Chunlab, Inc.
2014 ~ present Assistant Professor, Department of Life Science, Hallym University
2016 ~ present Editorial board member, Journal of Microbiology and Biotechnology 

 

Studies & Books

■ Theses
- Kim S, Lee MJ, Lee JJ, Choi SH, Kim BS. (2017) Analysis of microbiota of the swimming crab (Portunus trituberculatus) in South Korea to identify risk markers for foodborne illness. LWT-Food Science and Technology. 86, 483-491.
- Wang JH, Kim BS, Han K, Kim H. (2017) Ephedra-treated donor-derived gut microbiota tranplantation ameliorates high fat diet-induced obesity in rats. Interantional Journal of Environmental Research and Public health. 14(6), 555.
- Oh B, Kim JW, Kim BS. (2016) Changes in the functional potential of the gut microbiome following probiotic supplementation during Helicobacter pylori treatment. Helicobacter. 21(6): 493-503.
- Lee MJ, Lee JJ, Chung HY, Choi SH, Kim BS. (2016) Analysis of microbiota on abalone (Haliotis discus hannai) in South Korea for improved product management. International Journal of Food Microbiology. 234: 45-52.
- Yeom Y, Kim BS, Kim SJ, Kim Y. (2016) Sasa quelpaertensis leaf extract regulates microbial dysbiosis by modulating the composition and diversity of the microbiota in dextran sulfate sodium-induced colitis mice. BMC Complementary and Alternative Medicine. 16:481.
- Chung HY, Lee KH, Ryu S, Yoon H, Lee JH, Kim HB, Kim H, Jeong HG, Choi SH, Kim BS. (2016) Genome sequence of Bacillus cereus FORC_021, a food-borne pathogen isolated from a knife at a sashimi restaurant. Journal of Microbiology and Biotechnology. 26(12): 2030-2035.
- Sul WJ, Kim IS, Ekpeghere KI, Song B, Kim BS, Kim HG, Kim JT, Koh SC. (2016) Metagenomic insight of nitrogen metabolism in a tannery wastewater treatment plant bioaugmented with the microbial consortium BM-S-1. Journal of Environmental Science and Health. Part A. 51(13): 1164-1172.
- Lee E, Lee SY, Kang MJ, Kim K, Won S, Kim BJ, Choi KY, Kim BS, Cho HJ, Kim Y, Yang SI, Hong SJ. (2016) Clostridia in the gut and onset of atopic dermatitis via eosinophil inflammation. Annals of Allergy, Asthma & Immunology. 117(1):91-92.e1.
- Oh B, Kim JS, Kweon M, Kim BS, Huh IS. (2016) Six-week diet correction for body weight reduction and its subsequent changes of gut microbiota: a case report. Clinical Nutrition Research. 5: 137-140.
- Chung HY, Na EJ, Lee KH, Ryu S, Yoon H, Lee JH, Kim HB, Kim H, Choi SH, Kim BS. (2016) Complete genome sequence of Vibrio parahaemolyticus FORC_023 isolated from raw fish storage water. Pathogens and Diseases. 74(4): ftw032.
- Oh B, Kim BS, Kim JW, Kim JS, Koh SJ, Kim BG, Lee KL, Chun J. (2016) The effect of probiotics on gut microbiota during the Helicobacter pylori eradication: randomized controlled trial. Helicobacter. 21(3): 165-174.
- Han K, Bose S, Kim YM, Chin YW, Kim BS, Wang JH, Lee JH, Kim H. (2015) Rehmannia glutinosa reduced waist circumferences of Korean obese women possibly through modulation of gut microbiota. Food & Function. 6(8): 2684-2692.
- Oh HY, Kim BS, Seo SS, Kong JS, Lee JK, Park SY, Hong KM, Kim HK, Kim MK. (2015) The association of uterine cervical microbiota with an increased risk for cervical intraepithelial neoplasia in Korea. Clinical Microbiology and Infection 21(7): 674.e1-9.
- Yang S, Lim JS, Khan MA, Kim BS, Choi DY, Lee EY, Ahn H. (2015) High-throughput nucleotide sequence analysis of diverse bacterial communities in leachates of decomposing pig carcasses. Genetics and Molecular Biology. 38(3), 373-380.
- Lee SA, Lim JY, Kim BS, Cho SJ, Kim NY, Kim OB, Kim Y. (2015) Comparison of the gut microbiota profile in breast- and formula- fed Korean infants using pyrosequencing. Nutrition Research and Practice. 9(3):242-248.
- Han K, Bose S, Wang JH, Kim BS, Kim MJ, Kim EJ, Kim H. (2015) Contrasting effects of fresh and fermented kimchi consumption on gut microbiota composition and gene expression related to metabolic syndrome in obese Korean women. Molecular Nutrition & Food Research. 59(5), 1004-1008.
- Mo S, Kim BS, Yun SJ, Lee JJ, Yoon SH, Oh CH. (2015) Genome sequencing of Clostridium butyricum DKU-01, isolated from infant feces. Gut Pathogens.7:8.
- Kweon O, Kim SJ, Blom J, Kim SK, Kim BS, Baek DH, Park S, Sutherland JB, Cerniglia CE. (2015) Comparative functional pan-genome analyses to build connections between genomic dynamics and phenotypic evolution in polycyclic aromatic hydrocarbon metabolism in the genus Mycobacterium. BMC Evolutionary Biology. 15:21.
- Jeon YS, Park SC, Lim J, Chun J, Kim BS. (2015) Improved pipeline for reducing erroneous identification by 16S rRNA sequences using the Illumina MiSeq platform. Journal of Microbiology. 53 (1), 60-69.
- Park S, Song KM, Kim HJ, Kim BS, Rhee YK, Lee MK. (2014) Characterization and use of microbial communities in Doenjang to control the unpleasant odor of Ginkgo epicarp. Food Science and Biotechnology. 23(6), 1959-1964.
- Kim HJ, Kim MJ, Turner TL, Kim BS, Song KM, Yi SH, Lee MK. (2014) Pyrosequencing analysis of microbiota reveals that lactic acid bacteria are dominant in Korean flat fish fermented food, Gajami-sikhae. Bioscience, Biotechnology, and Biochemistry. 78(9), 1611-1618.
- Lee Y, Kim BS, Chun J, Yong JH, Lee YS, Yoo JS, Yong D, Hong SG, D’Souza R, Thomson KS, Lee K, Chong Y. (2014) Clonality and resistome analysis of KPC-producing Klebsiella pneumonia strain isolated in Korea using whole genome sequencing. Biomed Research International. 2014:352862.
- Song MY, Kim BS, Kim H. (2014) Influence of Panax ginseng on obesity and gut microbiota in obese middle-aged Korean women. Journal of Ginseng Research. 38(2), 106-115.
- Kim BS, Yi H, Chun J, Cha CJ. (2014) Genome sequence of type strain Staphylococcus aureus subsp. aureus. Gut Pathogens. 6:6.
- Kim BS, Song MY, Kim H. (2014) The anti-obesity effect of Ephedra sinica through modulation of gut microbiota in obese Korean women. Journal of Ethnopharmacology. 152 (3), 532-539.
- Jeon YS, Lee K, Park SC, Kim BS, Cho YJ, Ha SM, Chun J. (2014) EzEditor: A versatile sequence alignment editor for both ribosomal RNA and protein coding genes. International Journal of Systematic and Evolutionary Microbiology. 64(2), 689-691.
- Kim BS, Bae HS, Lim CY, Kim MJ, Kim JY, Kim JE, Kim H. (2013) Comparison of gut microbiota between Sasang constitutions. Evidence-Based Complementary and Alternative Medicine. Volume 2013, article ID 171643.
- Kim IS, Ekpeghere KI, Ha SY, Kim BS, Song B, Kim JT, Kim HG, Koh SC. (2013) Full-scale biological treatment of tannery wastewater using the novel microbial consortium BM-S-1. Journal of Environmental Science and Health, Part A. 49(3), 355-364.
- Hur M, Lee I, Tak BM, Lee HJ, Yu JJ, Cheon SU, Kim BS. (2013) Temporal shifts in cyanobacterial communities at different sites on the Nakdong River in Korea. Water Research. 47(19), 6973-6982.
- Kim M, Lee KH, Yoon SW, Kim BS, Chun J, Yi H. (2013) Analytical tools and databases for metagenomics in Next-Generation Sequencing era. Genomics & Informatics. 11(3), 102-113.
- Kim BS, Jeon YS, Chun J. (2013) Current status and future promise of the human microbiome. Pediatric Gastroenterology, Hepatology & Nutrition. 16 (2), 71-79.
- Kim IS, Ekpeghere KI, Ha SY, Kim SH, Kim BS, Song B, Chun J, Chang JS, Kim HG, Koh SC. (2013) An eco-friendly treatment of tannery wastewater by bioaugmentation of a novel microbial consortium. Journal of Environmental Science and Health, Part A. 48(13), 1732-1739.
- Jeon YS, Chun J, Kim BS. (2013) Identification of household bacterial community and analysis of species shared with human microbiome. Current Microbiology. 67(5):557-563.
- Ahn KH, Ko KB, Sung BW, Choi JS, Kim BS, Kim KS. (2013) Settling and dewatering characteristics of mixed microorganisms according to changes in the SRT. Desalination and Water Treatment. 51:6201-6209.
- Khodakovskaya M, Kim BS, Kim JN, Alimohammadi M, Dervishi E, Mustafa T, Cerniglia CE. (2013) Carbon nanotubes as plant growth regulators: effects on tomato growth, reproductive system and soil microbial community. Small. 9(1):115-123.
- Kim CT, Kim BS, Kim MJ, Park BH, Kwon S, Maeng HY, Kwak J, Chun J, Cho YJ, Kim N, Kim CJ, Maeng JS. (2012) Draft genome sequencing of Bacillus sp. M2-6, Isolated from the roots of a Korean Ginseng, Panax ginseng C. A. Meyer, after high hydrostatic pressure processing. Journal of Bacteriology. 194 (24):7003-7004.
- Kim JN, Kim BS, Kim SJ, Cerniglia CE. (2012) Effects of Crude oil, Dispersant, and Oil-dispersant mixtures on Human fecal microbiota in an in vitro culture system. mBio. 3(5):00376-12.
- Kim BS, Kim CT, Park BH, Kwon S, Cho YJ, Kim N, Kim CJ, Chun J, Kwak J, Maeng JS. (2012) Draft genome sequencing of Staphylococcus saprophyticus subsp. saprophyticus M1-1, isolated from the Gills of a Korean Rockfish, Sebastes schlegili Hilgendorf, after high hydrostatic pressure processing. Journal of Bacteriology. 194(16):4441-4442.
- Kim BS, Kim JN, Yoon SH, Chun J, Cerniglia CE. (2012) Impact of enrofloxacin on the human intestinal microbiota revealed by comparative molecular analysis. Anaerobe. 18 (3), 310-320.
- Kim DW, Heinze TM, Kim BS, Schnackenberg LK, Woodling KA, Sutherland JB. (2011) Modification of Norfloxacin by a Microbacterium sp. Strain Isolated from a Wastewater Treatment Plant. Applied and Environmental Microbiology. 77(17), 6100-6108.
- Kim BS, Kim JN, Cerniglia CE. (2011) In vitro culture conditions for maintaining a complex population of human gastrointestinal tract microbiota. J Biomed Biotechnol. Vol 2011, 838040.
- Lim YW, Kim BK, Kim C, Jung HS, Kim BS, Lee JH, Chun J. (2010) Assessment of soil fungal communities using pyrosequencing. J. Microbiol. 48(3), 284-289.
- Kim BS, Kim OS, Moon EY, Chun J. (2010) Vitellibacter aestuarii sp. nov., isolated from tidal flat sediment, and an emended description of the genus Vitellibacter. International Journal of Systematic and Evolutionary Microbiology. 60(9), 1989-1992

 

Others

■ Academy Activity
- The Microbiological Society of Korea
- The Korean Society for Microbiology and Biotechnology

 

■ Major Research Topics
- Studies on Human Microbiome There are much more and various microorganisms than the number of human cells and genes in the human body. We try to reveal and investigate the composition and roles of various microorganisms by conducting studies through the utilization of the Next-Generation Sequencer, the analysis device of bulk sequence listing. Through this, we study the correlations between various diseases and microbial communities and application plans to keep healthy. We can utilize the various results in the industry and health science fields.
- Studies on Microorganism Metagenomics Microoganisms coexist by the complex structure in all environments in the earth including men. However, most microorganisms cannot be incubated in laboratories. We study the composition and ecological roles of the microorganisms that actually exist in environments by utilizing metagenomics. We try to help management plans of various environments through results of the studies on household microiome and ecosystem microbiome.
- Studies on microorganisms' genomics We study the correlations between microorganism species' roles and their evolutionary ecology by analyzing their whole genome. We try to devise various gene detection and utilization methods.